PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g547580.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 418aa    MW: 47727.9 Da    PI: 7.5465
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g547580.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B333.95.7e-11241081099
                       HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
                B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                       vl+++ l +p + ++++g     + t  l+ +++ +W ++l  +k+ g+++l++GW++F++   L  g +++F+++g+ s f   v++f +
  Pd.00g547580.m01  24 VLSKDVLKFPESVVTKYGDC--LGDTAFLKVPNNAVWPIEL--TKRNGQVWLQQGWSNFADFYSLAFGYVLLFSYEGNhSHF--QVRIFMR 108
                       56788889999999999755..6679***************..9********************************998888..8888865 PP
2B339.88.2e-13155240999
                       HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                        +l+ g l +p   + ++g   +   t  ++ ++g  W ++l  ++++++++l++GW eF+k+  L++g f+vF++ g ++ +l +++frk
  Pd.00g547580.m01 155 RTLQDGKLEIPIIAVHTYGDYMAD--TAYFNVPDGSIWPIEL--TRRDREIWLGRGWPEFAKSYSLEDGCFLVFSYAG-KCSHLQLRIFRK 240
                       556667788999999888666444..89**************..********************************99.777789999998 PP
3B358.71.1e-18315413298
                       EEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SS. CS
                B3   2 fkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkldgr. 87 
                         + +++++ +++ l+++ +f+++h   +    ++  +tl+ ++ ++W+v++ ++ ++gr    + + GW+ Fv++n+L+egD +vF+l+++ 
  Pd.00g547580.m01 315 TVIRMQPSYVRNH-LRISSSFVKKHilsD----GECNVTLQISDKKTWSVRCLIDVYGGRlsaRLQRHGWQAFVRDNQLEEGDACVFELIEKa 402
                       5566778888888.***********6432....33479999999********9999998866444559**********************988 PP

                       SEE..EEEEE- CS
                B3  88 sefelvvkvfr 98 
                        + +l+v++fr
  Pd.00g547580.m01 403 PKIKLRVRIFR 413
                       *********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 418 aa     Download sequence    
MGSSSRHGKG LAFLVDSRSF FKIVLSKDVL KFPESVVTKY GDCLGDTAFL KVPNNAVWPI  60
ELTKRNGQVW LQQGWSNFAD FYSLAFGYVL LFSYEGNHSH FQVRIFMRSP LEIDYFGSTV  120
KEEDNLNGEM DYSNSPESPA SLMNAPSFFK IVLERTLQDG KLEIPIIAVH TYGDYMADTA  180
YFNVPDGSIW PIELTRRDRE IWLGRGWPEF AKSYSLEDGC FLVFSYAGKC SHLQLRIFRK  240
NTLEMEYNSS SDDTEDNSNT SCDQTEGEKR THGGDGGKTA SHKSTEVDLR TAKLESWKGR  300
AFAKASSFKY DNPFTVIRMQ PSYVRNHLRI SSSFVKKHIL SDGECNVTLQ ISDKKTWSVR  360
CLIDVYGGRL SARLQRHGWQ AFVRDNQLEE GDACVFELIE KAPKIKLRVR IFRDKDQV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.15e-17B3 family protein