PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g547590.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 294aa    MW: 33112.5 Da    PI: 7.5964
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g547590.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B341.13.2e-1329116899
                       -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
                B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                         +l+ g l +pk  + e+g   +   ++ le ++g +W vkl  r + g+++l+kGW eF+k   Lk g  + F++ g+ s f  +v++f +
  Pd.00g547590.m01  29 QQALQDGKLKIPKMLVMEYGDLMAD--KIFLEVPDGAVWPVKL-TRPCNGEIWLQKGWPEFAKFYSLKHGCLLFFRYGGEhSHF--RVRIFMR 116
                       45667788***********766444..7***************.5888888**************************9976777..9988865 PP
2B341.81.9e-132012891398
                       TT-EE--HHH.HTT...---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS..SEE..EEEEE- CS
                B3  13 sgrlvlpkkfaeeh...ggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr..sefelvvkvfr 98 
                       ++ + ++ +fa++h    g+  +  ++tl+   + rsW vk+ y++++++ +   GW  Fvk+ +L+egD  vF+l+++  ++  + v++fr
  Pd.00g547590.m01 201 NASIPISVPFANKHicaRGV-SS--DVTLQIsNDERSWAVKCMYNGRPRTRFHNFGWGAFVKDTHLEEGDAGVFELINKgpDKIAFEVSIFR 289
                       566779999*****997555.34..4555542688***************999**********************99542455555666665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MSSRSRREGK GPAFLLSTPF PSFLKIVVQQ ALQDGKLKIP KMLVMEYGDL MADKIFLEVP  60
DGAVWPVKLT RPCNGEIWLQ KGWPEFAKFY SLKHGCLLFF RYGGEHSHFR VRIFMRNTLE  120
MKYVSSSTDD EAEGNSNPSS ETEGQGNKHD RGKRTHGADH GGKSTASEAP LRTFAKTELE  180
DLAYSKALSF KSNNPFFCDE NASIPISVPF ANKHICARGV SSDVTLQISN DERSWAVKCM  240
YNGRPRTRFH NFGWGAFVKD THLEEGDAGV FELINKGPDK IAFEVSIFRV EDEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.14e-26B3 family protein