PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g547620.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 235aa MW: 26889.5 Da PI: 8.8936

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g547620.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	38.9	1.6e-12	18	96	17	99
E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++pkkf+ ++g + +++ l l + s+ W+v l r+ +g++++ kGW +F + L+ +vF ++g+s+f v vf++ Pd.00g547620.m01 18 RIPKKFVMKYGDDLSNPVSLELPSGSSSAWKVDL--RRLDGEVWFDKGWADFSEFYSLDRDHWLVFGYKGNSKF--QVCVFDR 96 69******88877888888888888***..********************************9999..9999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MILSCFDRLL DTISVVQRIP KKFVMKYGDD LSNPVSLELP SGSSSAWKVD LRRLDGEVWF 60 DKGWADFSEF YSLDRDHWLV FGYKGNSKFQ VCVFDRTCTE IDYPLRKQKM EETDDTDDYF 120 HEDSSDDSVE EQPADSTCLR KTRKKSSLPC LMPQKKNRTS SRDDYPAKLD SGSTSSTRRF 180 KKRTPGLLGS IRPLPKSGKA TALQRANAYK SQHLFSVIVA MKPSYITGYI LVSFL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	178	184	RRFKKRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49475.1	2e-22	B3 family protein