PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g547650.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 309aa    MW: 35118.6 Da    PI: 7.2372
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g547650.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.72.9e-151096197
                      EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
                B3  1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94
                      ffk+l   + +++ +l +p  f  ++ g+++++s    l  + + +W+v++  +k  ++++++kGWkeFv+++gLk  +f++F++ g+s+f   v
  Pd.00g547650.m01 10 FFKAL--VHDFSN-QLKIPPAFYVHFaGEVPRRS----LLRTPSGTWNVNV--EKVNDGFFFQKGWKEFVHDHGLKLCEFLIFRYAGNSKF--DV 93
                      67777..556665.5********88876666654....44555569*****..99999*****************************9999..55 PP

                      EEE CS
                B3 95 kvf 97
                       v+
  Pd.00g547650.m01 94 DVY 96
                      444 PP
2B346.56.7e-152262903699
                       EEEEETTS...-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  36 ltledesg...rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                         +++ +    r+W vk+i +++s++  l++GW +Fv++  Lk+gD++vF+l++r+++ ++v++ ++
  Pd.00g547650.m01 226 AYVNNGRLdskRRWLVKCISNRNSSK--LSAGWYQFVRDRALKVGDVCVFELIDRNDAVMKVSISDA 290
                       44444222445*******77777766..9************************99999999999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MARRRRKPSF FKALVHDFSN QLKIPPAFYV HFAGEVPRRS LLRTPSGTWN VNVEKVNDGF  60
FFQKGWKEFV HDHGLKLCEF LIFRYAGNSK FDVDVYGRNG CKKEFVMAVS KNDRSLEEGH  120
DNAIHGTQNV DGQGFGSADG TTTSQAICAI KNEVIDVESD TSMDIDEPDT QEDQLNEDSE  180
IALPRELGST EHFYSRTQME NPSEALEAAK KFSSKHPFFK AIMHKAYVNN GRLDSKRRWL  240
VKCISNRNSS KLSAGWYQFV RDRALKVGDV CVFELIDRND AVMKVSISDA TVELFFSMMG  300
SFACDARCF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.18e-25B3 family protein