PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g552520.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 369aa    MW: 39484.9 Da    PI: 7.4992
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g552520.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM255.3e-08267340673
               NAM   6 rFhPtdeelvveyLkkkvegkk....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkr 73 
                       +F+P+d el+ e+L++k+   +    + ++e+i+++d    iy+ +P +Lp   k++ ++ +fF+k+ ++ atg+ 
  Pd.00g552520.m01 267 HFDPSDAELL-EHLAAKCGVGNrkphMFIDEFIPTLDgdngIYYDHPANLP-GSKNDGSSFHFFHKTINAFATGHT 340
                       6*********.899999766554565444456777766677**********.556778899******999988764 PP
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    
MPYVTLGGGG GSSGNHIEES QHGMSFASFS GNNSTGSCLN FSIMAQNPAI FQSLPDMAQQ  60
GYKVGLAPQA VQKKNHQISE RKTGGGSNNA DDGLKAASGK SSSSIGQRQT LVFDNSARTL  120
NFMSSHVTGS WPSRSIALTT TATNAPVDSK TSSNSQQQHM FQFQLQKPHM LQQQQPAIAA  180
KFPKNSACFV SNAVADSATA LNNSLSGKLP AEIGNLSNLQ IFNIASNHLS GEISGELPPR  240
LEYLNLSSNS FSGEIPKSIV NLTGLQHFDP SDAELLEHLA AKCGVGNRKP HMFIDEFIPT  300
LDGDNGIYYD HPANLPGSKN DGSSFHFFHK TINAFATGHT GRDKVYNLAF GIYEVNHYVR  360
LVGFVSSSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.13e-25NAC family protein