PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g553030.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 247aa    MW: 26624.6 Da    PI: 9.0909
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g553030.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.12.9e-20117167256
               AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                       +y+GVr+++ +g+W+AeIrd +     + +r++lg+f tae Aa+a+++a+++++g+
  Pd.00g553030.m02 117 RYRGVRQRP-WGKWAAEIRDpF-----KaTRVWLGTFETAEAAAQAYDEAALRFRGN 167
                       7********.**********66.....56*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MSAMVSALAH VVAGDEELAA TESSLVINRQ SEDVGGGLIS SSVGGSDSGT KRGREEEEGG  60
GGQSVTRLCR AFGEFPQRSS SPVLGEGSST TPPTQTAFPP STFVYSATQI AEPIRRRYRG  120
VRQRPWGKWA AEIRDPFKAT RVWLGTFETA EAAAQAYDEA ALRFRGNKAK LNFPENVRLR  180
TPIADSLTTQ LNNSAPPNTL LSVATSTEPI VHSQALQSMQ HSSHEASRNL LSYSHGGLEV  240
NPRRRTL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.17e-28ERF family protein