PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g554230.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 449aa MW: 50140.9 Da PI: 6.124

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g554230.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	61.6	2.6e-19	5	77	55	127
NAM 55 ekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyr 127 +++ +fFs+ +y+++k+++r+t+ g+Wk tg+++e+ ++ +++++g k++L+fy g+a+++ ktdWvmhey Pd.00g554230.m01 5 DENGFFFSQP--EYTQKKNTKRSTEVGFWKITGREHEIRTRdrRRTVIGKKRILTFYIGHARNSDKTDWVMHEYY 77 4556888876..5677899******************99767778*************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MKPDDENGFF FSQPEYTQKK NTKRSTEVGF WKITGREHEI RTRDRRRTVI GKKRILTFYI 60 GHARNSDKTD WVMHEYYIPK AHPNANQRDF VLCHLKKNVK KSDEIHTDVA TTCDEGEPST 120 HNASDFEHPP AHDILEEYVD YIALQPAFAA NDSDVEFAEF LETVLVEPDG GVTSDTDMEP 180 FPGHVQAEML SEGFYGSSQP SRDTGGIFRN QISPQAASSV NVAPKPQTDR VQLNSDTSQG 240 AHGPRHQPGP IIDTSADEYY TREKTRRRTN PPAKPKQPAY RRTAADLPQK QISPTNSSQD 300 KKVAQGKNAE KVTGMEVSVA MCTNSLDLRG LYKHTIPLIN ILMQMLTNGL ATAIIGETSV 360 VSTSFSFVIP ISHSQLRKAS MAENDAFAFL KGDSNGDFIT SSAFCEALHQ VNLIGQPSGL 420 GFQETRDLWI QADVDANGVL DYEEFKNRI

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MKPDDENGFF FSQPEYTQKK NTKRSTEVGF WKITGREHEI RTRDRRRTVI GKKRILTFYI  60
GHARNSDKTD WVMHEYYIPK AHPNANQRDF VLCHLKKNVK KSDEIHTDVA TTCDEGEPST  120
HNASDFEHPP AHDILEEYVD YIALQPAFAA NDSDVEFAEF LETVLVEPDG GVTSDTDMEP  180
FPGHVQAEML SEGFYGSSQP SRDTGGIFRN QISPQAASSV NVAPKPQTDR VQLNSDTSQG  240
AHGPRHQPGP IIDTSADEYY TREKTRRRTN PPAKPKQPAY RRTAADLPQK QISPTNSSQD  300
KKVAQGKNAE KVTGMEVSVA MCTNSLDLRG LYKHTIPLIN ILMQMLTNGL ATAIIGETSV  360
VSTSFSFVIP ISHSQLRKAS MAENDAFAFL KGDSNGDFIT SSAFCEALHQ VNLIGQPSGL  420
GFQETRDLWI QADVDANGVL DYEEFKNRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27300.1	2e-14	NAC family protein