PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g554340.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 370aa    MW: 41911.5 Da    PI: 6.9647
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g554340.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM62.31.5e-1957755127
               NAM  55 ekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyr 127
                       +++ +fFs+   +y+++k+++r+t+ g+Wk+tg+++e+ ++  +++++g k++L+fy g+ +++ ktdWvmhey 
  Pd.00g554340.m01   5 DENGFFFSQP--EYTQKKKTKRSTEVGFWKKTGREHEIRTRdrRRTVIGKKRILTFYIGHGRNSDKTDWVMHEYY 77 
                       4556888876..567789*********************99767778***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    
MKPDDENGFF FSQPEYTQKK KTKRSTEVGF WKKTGREHEI RTRDRRRTVI GKKRILTFYI  60
GHGRNSDKTD WVMHEYYIPK AHPNANQRDF VLCHLKKNVK KSDEIHTDVA TTCDEGEPST  120
HNASDFEHPL AHDILEEYVD YIALQPAFAA NDSDVEFAEF LETVLVEPDG GVTSDTDMEP  180
FPGHVQAEML SEGFYGSNQP SRDTGGIFRN QISPQAASSV NVAPKPQTDR VQLNSDTSQG  240
AHGPRHQPGP IIDTSADEYY TKEKTRRRTN PPAKPKQPAY RRTAADLPQK QISPTNSSQD  300
KKVAQGKNAE KGMEQTQNRT TVSNWKDSFI TWQTSSLTTS PPSAYISNIF LGLSLFYFCV  360
REVVLFGEWS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27300.14e-14NAC family protein