PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g554350.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 394aa MW: 45557.6 Da PI: 6.3329

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g554350.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	142.7	2.2e-44	14	140	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 +p+GfrFhPtdeelv++yLkkk++g + +++++i+e+di+k+ePwdLp + +k+++++w+fFs+ + ++++knr+t++gyWk tg++++ Pd.00g554350.m01 14 VPVGFRFHPTDEELVTHYLKKKLKGMDSHVSNIIREIDILKFEPWDLPeRsLLKSDDENWFFFSRPEY---NKHKKNRTTQEGYWKITGREHA 103 599*************************99***********953467788899999876...4579*************** PP NAM 92 vlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127 ++++ +++++g k++L+fy+gr +++e+t+Wvmhey Pd.00g554350.m01 104 IKARdNRSVIGRKRILTFYRGRVRNSERTNWVMHEYY 140 9967778***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MIVISRAAED DLSVPVGFRF HPTDEELVTH YLKKKLKGMD SHVSNIIREI DILKFEPWDL 60 PERSLLKSDD ENWFFFSRPE YNKHKKNRTT QEGYWKITGR EHAIKARDNR SVIGRKRILT 120 FYRGRVRNSE RTNWVMHEYY IPDDNPNAQR DFILCRLKKN VKKSDENTDV VTTCDEGEPS 180 THIAFDVENQ PIPGMDILEE DTQQPENLDY FEQTRDLWLA SSCSNNDHNA TFADNDSESE 240 FEECLRTFNT KPFRSGVQSL ERLYELQCDS SQSIRDTDII HLNQLSRQAA SSVNVAPKVE 300 PQTDRVQLKT GTSHGAHGIR LQSDPIIAVR DTSAGEYYSR ETTRRITYPP AKPKAPAYHR 360 TAADLAEKQI EKQISMTKSH RQEGASRQYG ADTE

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MIVISRAAED DLSVPVGFRF HPTDEELVTH YLKKKLKGMD SHVSNIIREI DILKFEPWDL  60
PERSLLKSDD ENWFFFSRPE YNKHKKNRTT QEGYWKITGR EHAIKARDNR SVIGRKRILT  120
FYRGRVRNSE RTNWVMHEYY IPDDNPNAQR DFILCRLKKN VKKSDENTDV VTTCDEGEPS  180
THIAFDVENQ PIPGMDILEE DTQQPENLDY FEQTRDLWLA SSCSNNDHNA TFADNDSESE  240
FEECLRTFNT KPFRSGVQSL ERLYELQCDS SQSIRDTDII HLNQLSRQAA SSVNVAPKVE  300
PQTDRVQLKT GTSHGAHGIR LQSDPIIAVR DTSAGEYYSR ETTRRITYPP AKPKAPAYHR  360
TAADLAEKQI EKQISMTKSH RQEGASRQYG ADTE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.1	2e-45	NAC family protein