PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g554360.m04

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 663aa MW: 76580.3 Da PI: 4.8187

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g554360.m04	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	52.8	1.4e-16	17	87	51	127
NAM 51 vkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127 +k+++++w+fF k +k +ratk+g+Wk t kd+ ++++ +++++ k++L+fy gr +k++kt+Wv+hey Pd.00g554360.m04 17 IKSDDENWFFFYKYKK-------GSRATKEGFWKITSKDRVIKARdNRTVIAKKRILTFYIGRVRKSTKTNWVIHEYY 87 5678899999987644.......579999************995566688899********************7 PP
2	NAM	28.6	4.1e-09	392	433	12	54
NAM 12 eelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkae 54 eelv++yLk+k +++++++ ++i+e+di+k++Pw++p ++++ Pd.00g554360.m04 392 EELVDHYLKNKRQARDFHV-DHIPEIDICKYDPWEIPGLFTEQ 433 9****************.89************9543332 PP

Sequence ? help Back to Top
Protein Sequence Length: 663 aa Download sequence
MARLSRAAEE EEDKSLIKSD DENWFFFYKY KKGSRATKEG FWKITSKDRV IKARDNRTVI 60 AKKRILTFYI GRVRKSTKTN WVIHEYYIPD DAHPNANKQR DFVLCHLKKN VKKPDENTDV 120 ATTCDEGETS THNASDFENQ PVHGMEDTRP RENLDYFERT RDLWLANSFS NNDHDAFQSD 180 FEANDPEAEA FVRSVLNDPQ CDTDTEPIHV SLQGRRFTSS PSTRDTEVIL HNQLSRPAAS 240 PVHVAPQPQT SELQLQSGTS ERTHRPQPKS INVLRRTSAV NVDAFNVSIN CIRLATDDEY 300 YTKERARRRT YPPVGKLREI KLQQSKAKEP EERRTSVDFP QKQISITKSS IDRKDGWNIA 360 DSKLVLEMQK TDHRWIKIQD ENQPIPMESG KEELVDHYLK NKRQARDFHV DHIPEIDICK 420 YDPWEIPGLF TEQDSPYHAS PDPQLAERDF VLYRMKKNPD KKDTSVFAEG EPSSYNWSNC 480 EDQAADDVTP ESQDHSPSTL QSPAYIELGD VLQVNDFNED CTDMQSPFGD YDYSVTHKND 540 FSTCDEVAYD MSQEQAQYYH SFTLPSPIYS ELGSVPHDDV YNNEWQSAYA NFENQTTDER 600 ISEECPQPKE NLRSILSASQ LADYTSQSLM NIEEYQMRPC EIGIEGAAGT NWEGSFFNFP 660 LKP

Sequence ? help Back to Top

Protein Sequence Length: 663 aa Download sequence

MARLSRAAEE EEDKSLIKSD DENWFFFYKY KKGSRATKEG FWKITSKDRV IKARDNRTVI  60
AKKRILTFYI GRVRKSTKTN WVIHEYYIPD DAHPNANKQR DFVLCHLKKN VKKPDENTDV  120
ATTCDEGETS THNASDFENQ PVHGMEDTRP RENLDYFERT RDLWLANSFS NNDHDAFQSD  180
FEANDPEAEA FVRSVLNDPQ CDTDTEPIHV SLQGRRFTSS PSTRDTEVIL HNQLSRPAAS  240
PVHVAPQPQT SELQLQSGTS ERTHRPQPKS INVLRRTSAV NVDAFNVSIN CIRLATDDEY  300
YTKERARRRT YPPVGKLREI KLQQSKAKEP EERRTSVDFP QKQISITKSS IDRKDGWNIA  360
DSKLVLEMQK TDHRWIKIQD ENQPIPMESG KEELVDHYLK NKRQARDFHV DHIPEIDICK  420
YDPWEIPGLF TEQDSPYHAS PDPQLAERDF VLYRMKKNPD KKDTSVFAEG EPSSYNWSNC  480
EDQAADDVTP ESQDHSPSTL QSPAYIELGD VLQVNDFNED CTDMQSPFGD YDYSVTHKND  540
FSTCDEVAYD MSQEQAQYYH SFTLPSPIYS ELGSVPHDDV YNNEWQSAYA NFENQTTDER  600
ISEECPQPKE NLRSILSASQ LADYTSQSLM NIEEYQMRPC EIGIEGAAGT NWEGSFFNFP  660
LKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22290.1	8e-19	NAC family protein