PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g554420.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 478aa    MW: 52815.7 Da    PI: 4.0672
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g554420.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM44.16.6e-141763248
               NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48
                       pGfrF Pt+e lv++yLkkk+egk+ +++++i+e+d++k+eP d p
  Pd.00g554420.m01 17 LPGFRFYPTEEVLVSYYLKKKIEGKDSNFSHIIPEIDVCKHEPCDVP 63
                      69***************************999*************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 478 aa     Download sequence    
MSSISTMEEG DSIPVVLPGF RFYPTEEVLV SYYLKKKIEG KDSNFSHIIP EIDVCKHEPC  60
DVPGNPLIFL TSSSLPISSF LLKDFVLCRL KNKSANYKKL KDDSICDELA DTGSGGGIAS  120
NSEDDQAAGA DMISEPLEHL ASQEVGDVQN GNGSGLIENN DISICDDDQI DAWIFSDFDS  180
QAAYDLLQEY YAEPGENLDS PLPPPQPPQP PLPQDYCFST QQSPLYTNQG NVPYFYDADC  240
NRQQSPIGDN SYLTHKNNIS MNYQIEPVSD ITYGAQNQAT GGSNSEVYNN STNDFEEPVS  300
NITYNCNNGA PDERILEGDG PEENLGSPFD PFQLLDFTLL SPMNSELGDF EHGNKLCWHA  360
MSWALYTPRG TITLVYISGT GGFGNFFIVM DIYVQDKRIR LTKSVLGLLG RCCVSSQHSQ  420
LLETRSLLGE LVGHWKVATF EMPSGTLFSS GESRQNNLET MSLLSTELQM LLKSIVFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17260.11e-12NAC family protein