PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g554430.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 496aa MW: 55039.9 Da PI: 4.4728

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g554430.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	81.3	2.1e-25	63	183	14	128
NAM 14 lvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelv 100 l ++ ++ ++gk ++ ++i+e+d yk+ePw+L +++ w Fs+ d+kya++ r nr t++g+Wk tgk +e++s+ +++++ Pd.00g554430.m01 63 LFLRFSERMMQGKASQARHIIPEIDFYKYEPWELAGlmlpDSPYQTRMWLCFSRPDHKYANSPRCNRLTEKGFWKITGKPREIKSRqlSKSVT 155 55566678899999999999************8434553334778**********************************97666667 PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 k+tL+f+ gr +k++kt Wv +ey+l Pd.00g554430.m01 156 CKKRTLTFHLGRPSKSSKTGWVKQEYTL 183 7789********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 496 aa Download sequence
MSGSSSTTTE AWVLDLLRGF RYHPPEEEMV NLLKKQVEGQ GSQAMPEIED KPWDLPDNES 60 IQLFLRFSER MMQGKASQAR HIIPEIDFYK YEPWELAGLM LPDSPYQTRM WLCFSRPDHK 120 YANSPRCNRL TEKGFWKITG KPREIKSRQL SKSVTCKKRT LTFHLGRPSK SSKTGWVKQE 180 YTLTSTVPGS NLSGLVLLRM KNKSADYESD NKQQQDVSIY DESADPAIGG DMASNSQDDQ 240 AAANHMILEA EDLLGSGNHN DGEPGGFDII QELCAQLGLD SPSPPPEQPQ SHQLPELGNV 300 PGTGDYLASN SDNQAAAIHH LTTDEEELLA YKKLERVLLG GGNPDDGEPG SCVSSDKLQE 360 LCAQPGEDLD SPVPPPGHPE LGNAPDVYTD KCSIWSSPIR DNDSSLANKN NIPTNHDSKP 420 VSNTASNFEN QTTCERSSEV YCQSEENLQL FYRSLELEDY AFSSPISYLD LGDFLHTNNF 480 IGCNESQPAA LFPQSS

Sequence ? help Back to Top

Protein Sequence Length: 496 aa Download sequence

MSGSSSTTTE AWVLDLLRGF RYHPPEEEMV NLLKKQVEGQ GSQAMPEIED KPWDLPDNES  60
IQLFLRFSER MMQGKASQAR HIIPEIDFYK YEPWELAGLM LPDSPYQTRM WLCFSRPDHK  120
YANSPRCNRL TEKGFWKITG KPREIKSRQL SKSVTCKKRT LTFHLGRPSK SSKTGWVKQE  180
YTLTSTVPGS NLSGLVLLRM KNKSADYESD NKQQQDVSIY DESADPAIGG DMASNSQDDQ  240
AAANHMILEA EDLLGSGNHN DGEPGGFDII QELCAQLGLD SPSPPPEQPQ SHQLPELGNV  300
PGTGDYLASN SDNQAAAIHH LTTDEEELLA YKKLERVLLG GGNPDDGEPG SCVSSDKLQE  360
LCAQPGEDLD SPVPPPGHPE LGNAPDVYTD KCSIWSSPIR DNDSSLANKN NIPTNHDSKP  420
VSNTASNFEN QTTCERSSEV YCQSEENLQL FYRSLELEDY AFSSPISYLD LGDFLHTNNF  480
IGCNESQPAA LFPQSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.2	5e-23	NAC family protein