PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g554450.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 399aa    MW: 44517.4 Da    PI: 4.322
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g554450.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM47.46.3e-151992273
               NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.kvkaeek..ewyfFskrdkkyatgkr 73
                       pGfrF Pt+e lv +yLkkk+egk+ +++++i+e+d++k+eP d p   + ++ +  + +  ++ ++k+a+ k+
  Pd.00g554450.m01 19 LPGFRFYPTEEVLVGYYLKKKIEGKDSNFSHIIPEIDVCKHEPCDVPVlLLGSS-RldKDFVLCRLKNKSANYKK 92
                      69***************************999***************5233333.33255777777777665443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    
MSSISRTTME EGDSVPVVLP GFRFYPTEEV LVGYYLKKKI EGKDSNFSHI IPEIDVCKHE  60
PCDVPVLLLG SSRLDKDFVL CRLKNKSANY KKVKADSGGC IASNSEDDQA AATDMISEPL  120
EHLASQEVGD VLNGNGDHDE CTESPNGTGL IDNNDISSCD DDEIDTWIFY DFDNQAACDL  180
FQEQYCAEPG ENMDSLLPPP QPPLPPLPQD YCSSTQQSSL YTNQGNVPYV YDGDCNRQQS  240
PIGDRNSYLT HKNNMSMNNQ IEPVSNITYG VQNRATGESN SEVNNNSTND FKEPVSNITC  300
NFNNGAPNER ISKACSQPKE NLGSCFDPFQ LQDFTLLSPM NLELGDFEHD NKLYWHAMSC  360
HTLPLFMFIH GRCCEKNPTA KLYHKTRLEK LQSIALLSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17260.19e-13NAC family protein