PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g554520.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 229aa    MW: 25800.7 Da    PI: 7.7551
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g554520.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B396.22.2e-30116204185
                       EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                       f+kv tpsdv+k++rlv+pk++ae++         + ++  l ++d++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++ 
  Pd.00g554520.m01 116 FDKVVTPSDVGKLNRLVIPKQHAERYfpldstA--NDKGLLLNFQDRTGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFERG 204
                       89*************************999643..346779************************************************43 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MQCKCGVADH PLGAWLANEA FFPPGHLQAV GKFSSSSHNY NNSNYGSSPK YKATFVPPPL  60
PHHHQYQQQK PWAVHNHGSP EAINFMDLSL NHEQAAADGA NNNNNWPPNS EREHMFDKVV  120
TPSDVGKLNR LVIPKQHAER YFPLDSTAND KGLLLNFQDR TGKPWRFRYS YWNSSQSYVM  180
TKGWSRFVKE KKLDAGDIVS FERGVGDSDV DVVEAEAGYT PCFSGRLHP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.13e-60B3 family protein