PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g560050.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 445aa    MW: 49824.6 Da    PI: 4.8627
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g560050.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.42.6e-1899188299
                       EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
                B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                       +kv++ps+v+   +l lpkkf+ eh   +++++++ lede+g+++e k+     +  + l++GW++F  a++L egD++vF+l+  s+f  +v
  Pd.00g560050.m01  99 LKVMLPSHVTGGFWLGLPKKFCCEHL--PKQDIMIALEDENGEEFETKY--LADK--VGLSGGWRGFSIAHKLLEGDVIVFHLVTPSKF--KV 183
                       699*******************9995..34889****************..4444..45***********************9987888..88 PP

                       EEE-S CS
                B3  95 kvfrk 99 
                        ++r+
  Pd.00g560050.m01 184 YIVRS 188
                       88775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    
MAVLQDRKQS SSDLPPPKSN RRRPPRNKEN MFRKKSSSLT QSQTTKSIVV SANPMMPESH  60
KRKRATVESI YDTSQAQSSV LERAQEVEVS LDPKFPSLLK VMLPSHVTGG FWLGLPKKFC  120
CEHLPKQDIM IALEDENGEE FETKYLADKV GLSGGWRGFS IAHKLLEGDV IVFHLVTPSK  180
FKVYIVRSNG LDELDGALGL MRLDACKKMD TGDSTACERE ESETLEPISE DNAIAFNTKS  240
CPISDHSESE SGDVGFEVLD GLRLSESVVT FEEVKCMDDF NVLVNGLIIN SEFSKYILNK  300
YYELCCSQNS FLHEHLLEGL NCKLVAGVIS ETVNIADAIR VCNITTPEGN FSTWDQTLKA  360
FQGLGMNIGF LLDRLDQLVS LASKSKRFKE ARLEKDQAEE EMRCLEAKLL EVKEAVSRLE  420
SEIETLNTSS ENPELVFQEV AKSSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.12e-43B3 family protein