PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g560080.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 358aa    MW: 40347.3 Da    PI: 7.6713
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g560080.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3474.7e-1549137899
                       -HHHHT.....T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
                B3   8 sdvlks.....grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                       s+v +       r  lpkkf+ +h +k  ++++++lede+g+++e k+     +  + l++GW++F  +++L egD+v+F+++  s+f  +v 
  Pd.00g560080.m01  49 SMVVSAnpkvpERSGLPKKFCCDHLLK--QDTMIVLEDEKGEEFETKY--LAEK--VGLSGGWRGFSMSHKLLEGDIVIFHVVTPSRF--KVY 133
                       555554444445668*********887..7789***************..4444..55***********************8876888..888 PP

                       EE-S CS
                B3  96 vfrk 99 
                       ++r+
  Pd.00g560080.m01 134 IIRS 137
                       8876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MAVLQNQKHS SSSDPPPPSK SNRGRLPKNK EKLFSKKYSC ITQSQMTKSM VVSANPKVPE  60
RSGLPKKFCC DHLLKQDTMI VLEDEKGEEF ETKYLAEKVG LSGGWRGFSM SHKLLEGDIV  120
IFHVVTPSRF KVYIIRSNGL DEADCTVGLT RLDACIKQMD AGHIISCERE ESGNLEPIPE  180
DHAIAFNTKS RPLSDQSEND SEDLGFEVLD ELRLSESVVP FKEMYCMDNF NVLVNGLNIN  240
SEFSKYILNK YYELCCSQNS FLHEHLLEGL NCKLIVGVIS ETINIADAIR ACKITTSEGY  300
FSTWNKTLIA FEGLGMNVRF LRARLDQLAI LASKSKRFKE ARLEELRGKA FGSKRGHK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.12e-25B3 family protein