PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g560570.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 108aa    MW: 12706.7 Da    PI: 8.7082
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g560570.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.53.1e-10589285
                      EEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE- CS
                B3  2 fkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkld 85
                      +k+l+psdv+++  l + k  +e    +++e ++ +++ de+g+++ ++l+ r+++ r  ++ +k W+ Fvk+ g+ +gD++ F  +
  Pd.00g560570.m01  5 EKELSPSDVNQR--LAVTKGMLEFLpPIDPEHDVPVRVLDETGKVYVFYLSCRQGKHRkpVFQSKQWRVFVKERGIAAGDVMYFWAE 89
                      689989998865..89999999777988899999****************88555555668888*******************9744 PP
Sequence ? help Back to Top
Protein Sequence    Length: 108 aa     Download sequence    
MERCEKELSP SDVNQRLAVT KGMLEFLPPI DPEHDVPVRV LDETGKVYVF YLSCRQGKHR  60
KPVFQSKQWR VFVKERGIAA GDVMYFWAEE NAFHQTQYRI ALLKMLFS