PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g560900.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 391aa    MW: 44433.7 Da    PI: 9.1534
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g560900.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.52.5e-181099398
                      EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                B3  3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
                       +l+ s++l+ ++l++p +f++++g +   s+  tl  ++g++W+v +  +k ++++++ +GW+eF +   +++g f++F+++g+s+f  +v++f
  Pd.00g560900.m01 10 HKLILSSTLQAKQLMIPENFVKKFGDD--LSTVATLSVPDGNVWRVGI--KKADNKFWFHDGWQEFIERYSIRVGYFLTFRYEGHSSF--TVHIF 98
                      5677789999999***********988..88999999***********..**********************************9999..88888 PP

                      - CS
                B3 98 r 98
                      +
  Pd.00g560900.m01 99 N 99
                      5 PP
2B359.27.5e-19277366497
                       E-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
                B3   4 vltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                       vl ps+  + ++++lp  fae++ +g++     ++l++++gr+W v++ yr+++    l++GW eF  +n+L egD++vF+l + +e  l+v+
  Pd.00g560900.m01 277 VLRPSYLYRGCIMYLPSCFAEKNlNGVSG---FIKLQSSDGRQWPVRCLYRGGR--AKLSQGWYEFTLENNLGEGDVCVFELLKMKEVVLKVT 364
                       78899******************877743...5***************665555..66***********************988777767777 PP

                       EE CS
                B3  96 vf 97 
                       vf
  Pd.00g560900.m01 365 VF 366
                       65 PP
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    
MKNMIRPCFH KLILSSTLQA KQLMIPENFV KKFGDDLSTV ATLSVPDGNV WRVGIKKADN  60
KFWFHDGWQE FIERYSIRVG YFLTFRYEGH SSFTVHIFNL TTAEINYQPN ALSSTGGSVY  120
RHQVFEEMED DDSVEILGSS PKSIVTDSLR DKLFGDCATQ LIPGKDYNPP ALQNLFNGSK  180
PKNCTNWPDA GNPHPSKGSG LQAGEDIRSM KKTMRKKRKL DPTVQESSSQ HEKEVEIRFR  240
FYESASARKR TVTAEERERA INAAKTFEPV NPFCRVVLRP SYLYRGCIMY LPSCFAEKNL  300
NGVSGFIKLQ SSDGRQWPVR CLYRGGRAKL SQGWYEFTLE NNLGEGDVCV FELLKMKEVV  360
LKVTVFCVVE AAGFVNQPPQ QNASQAKMIR N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-138B3 family protein