PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g562230.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 165aa    MW: 18377.1 Da    PI: 9.5634
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g562230.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.52e-15109154148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       rg++T  E++ ++++  +lG++ W++Ia++++  Rt++++k++w+++l
  Pd.00g562230.m01 109 RGNFTDHEEKMIIHLQDLLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 154
                       89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MCSSRKKKGY FELLGLAQAE WGSPVCPLLQ PSQHEGPADA PAQPTPHAKP IVACFSSSVQ  60
PSIFSWPALS KLEPTSRQDL ALLLLRSPAS PLAHSLLLQH KARELGIKRG NFTDHEEKMI  120
IHLQDLLGNR WAAIASYLPQ RTDNDIKNYW NTHLKKEAQK APDRA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28910.19e-31MYB family protein