PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g563820.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

AP2

Protein Properties

Length: 348aa MW: 39444.7 Da PI: 8.5162

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g563820.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	51	3.5e-16	37	96	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n k+ ++++lg ++ +e Aa+a++ a++k++g Pd.00g563820.m01 37 SIYRGVTRHRWTGRYEAHLWDkNCWNEsqnKKgRQVYLGAYDDEEAAARAYDLAALKYWG 96 57*****************999955656446***********************98 PP
2	AP2	51.3	2.9e-16	139	190	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g Pd.00g563820.m01 139 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 190 89**99******99966...3.6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MERKCYQFSQ HPKEQVRTRV KRTRKSVRRD SPPQRSSIYR GVTRHRWTGR YEAHLWDKNC 60 WNESQNKKGR QVYLGAYDDE EAAARAYDLA ALKYWGQDTI LNFPLDTYPE ELKEMESQSK 120 EEYIGSLRRK SSGFSRGVSK YRGVARHHHN GRWEARIGRV FGNKYLYLGT YATQEEAATA 180 YDMAAIEYRG LNAVTNFDLS RYIKSLCPNN QNVPNNPQPK PNGDLGPTQN PNSKLGLGFI 240 PNYHSSSSSA SESTVALPRP GNGASASSAL GLLLQSSKFK EMLERTSTSS TDCSSTLSEP 300 DIPRRSFPDD IQTYFDCQDL NSYAEGDDII FGDLHSFASP VFHCELDA

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MERKCYQFSQ HPKEQVRTRV KRTRKSVRRD SPPQRSSIYR GVTRHRWTGR YEAHLWDKNC  60
WNESQNKKGR QVYLGAYDDE EAAARAYDLA ALKYWGQDTI LNFPLDTYPE ELKEMESQSK  120
EEYIGSLRRK SSGFSRGVSK YRGVARHHHN GRWEARIGRV FGNKYLYLGT YATQEEAATA  180
YDMAAIEYRG LNAVTNFDLS RYIKSLCPNN QNVPNNPQPK PNGDLGPTQN PNSKLGLGFI  240
PNYHSSSSSA SESTVALPRP GNGASASSAL GLLLQSSKFK EMLERTSTSS TDCSSTLSEP  300
DIPRRSFPDD IQTYFDCQDL NSYAEGDDII FGDLHSFASP VFHCELDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	5e-87	AP2 family protein