PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g564210.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 127aa    MW: 14681.3 Da    PI: 5.3212
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g564210.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR127.97.9e-0963125268
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkv 68 
                       +Y++ +++ GF v ++ s++ +++g+ +  t  C +egk+++++++     ++r++ + +Cka+l+v
  Pd.00g564210.m01  63 YYKQDGRQSGFPVIRRLSRN-RDDGNLKYVTISCAREGKSKSKSSN---FLKPRPSIKNDCKAQLRV 125
                       899999******99887655.69999***************99888...999************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    
MEESFARLEN YQHDAVEMNF NGIEKENNGD ETENNDTVVS VEEKVQDPRV GMMFDSFDEV  60
ITYYKQDGRQ SGFPVIRRLS RNRDDGNLKY VTISCAREGK SKSKSSNFLK PRPSIKNDCK  120
AQLRVVY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.18e-09FAR1 family protein