PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g564650.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 273aa    MW: 29730.9 Da    PI: 9.507
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g564650.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.0002281103123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       ++C++C + F ++  L  H++ H
  Pd.00g564650.m02  81 FSCNYCQRKFYSSQALGGHQNAH 103
                       89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
METQRPQMQP AQDYHQEHPP QAPNTDILLD LSLSNKEPDH RSNPELNLIN CFDSNASGNS  60
SPETSSPKGT TAHDAAEPRV FSCNYCQRKF YSSQALGGHQ NAHKRERTLA KKGHKSNCTA  120
ASSDALVRLP SILSHRFSSM ASLPLHGSFN RSLGVQVHST IHKPCYQLSN TSNTSLYGGH  180
NSNSNGCLRK SLDQQPAIRR LVVPQNNVFH VQGGVGSSSS SSSGGVGRFV NSTSVRKFSP  240
VTEGIGGLWW NSGVGHFKTK QDELQNLDLS LKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80730.18e-39C2H2 family protein