PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g565470.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 372aa MW: 43357.4 Da PI: 8.9114

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g565470.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	70.9	3e-22	11	94	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 ++Yn YAkevGF+vr+++s +++++e + + ++Cs +g+++ ++ + r r+etrtgC a+l++++ ++++w+v ++ leHnH l Pd.00g565470.m01 11 NYYNCYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRIKDVN-----RLRKETRTGCPAMLRMRLVDSKRWRVLEVTLEHNHLL 94 69***************************************9988.....99*******************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MEFESYDDAY NYYNCYAKEV GFRVRVKNSW FKRNSREKYG AVLCCSSQGF KRIKDVNRLR 60 KETRTGCPAM LRMRLVDSKR WRVLEVTLEH NHLLGAKIYK SIKKVGSGMK RKSQSSSDAE 120 KRTIKLYRAL VIDSGADGTS NSNPTDIRNF PDHPNQLNLK KDKYDQALQT HHRLEALADL 180 DSRNSSYMLK SRCYFELQLS KVYTNDILRK FESEVEGMYS CFSTSQLNPD GPVITYIVKE 240 QTEVDGNRRE VRDYEVLYNP SEMEVLCICG MFNLRGYLCR HTLSVLNQNG VEEIPAQYVL 300 SRWRKDIKRN YIFDHSCSGI DINNPVHRYD HLYKCIVQVV EEGRKSQDRY KVAFGALDEI 360 LNKLCLTEDP AL

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MEFESYDDAY NYYNCYAKEV GFRVRVKNSW FKRNSREKYG AVLCCSSQGF KRIKDVNRLR  60
KETRTGCPAM LRMRLVDSKR WRVLEVTLEH NHLLGAKIYK SIKKVGSGMK RKSQSSSDAE  120
KRTIKLYRAL VIDSGADGTS NSNPTDIRNF PDHPNQLNLK KDKYDQALQT HHRLEALADL  180
DSRNSSYMLK SRCYFELQLS KVYTNDILRK FESEVEGMYS CFSTSQLNPD GPVITYIVKE  240
QTEVDGNRRE VRDYEVLYNP SEMEVLCICG MFNLRGYLCR HTLSVLNQNG VEEIPAQYVL  300
SRWRKDIKRN YIFDHSCSGI DINNPVHRYD HLYKCIVQVV EEGRKSQDRY KVAFGALDEI  360
LNKLCLTEDP AL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	8e-67	FAR1 family protein