PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g565610.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 256aa    MW: 29063.1 Da    PI: 8.479
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g565610.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.16.7e-1385137155
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                       ++ +h  +Er+RR+++ + ++ Lr+ lP       ++K s ++ + ++v+YIk+Lq
  Pd.00g565610.m01  85 KKIMHRDIERQRRQEMATLYASLRSQLPLeY---LKGKKSISDHVHQTVNYIKHLQ 137
                       5789*************************77...9********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MDYIPSNTLQ FDQALQQADE LFQISCLPYT EHTTQENQAL PPTPSQDGRD LTCRPTSGQK  60
RKASISSSNI TFGEIDDEQN PKGNKKIMHR DIERQRRQEM ATLYASLRSQ LPLEYLKGKK  120
SISDHVHQTV NYIKHLQSNI QELHNKRDRL KRSCDISCSS STSTAVTMEN SLSPMKESVV  180
LVRPCKAGVE VVVNTPMKQR LALSRLLEIL KREGLSTISC ISAQVNEKLI YTIESQVSDG  240
KCIDMFELQH RLTKNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.12e-46bHLH family protein