PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g565710.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 246aa    MW: 27079.3 Da    PI: 9.4622
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g565710.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.96.6e-12136182455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h e+Er+RR+++N++f  Lr+++P+       K++ ++ L  Av YI++L+
  Pd.00g565710.m02 136 NHVEAERQRREKLNHRFYLLRSVVPNV-----SKMDRSSLLADAVAYINQLK 182
                       799***********************6.....5*****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MHGIQTLVCI ATPYGVLELA SLDVIKEDWG FVHLSKSLFG SDNNNNNRVS QQKGGREGNV  60
LAPLLENGIF SGSQKKLTRQ AAGTKEAARF NIGGSSPESL SGSVGNFTCE NTENTRSKKR  120
RRSSNNGASR ESSLLNHVEA ERQRREKLNH RFYLLRSVVP NVSKMDRSSL LADAVAYINQ  180
LKAKVEELEL KTQAQPQNPK RVSVNNLDNQ CSQSTSSIVD HHSSYNNTEV VPVEVDVKIM  240
GSEAII
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00870.13e-29bHLH family protein