PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g568240.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 412aa    MW: 46433.4 Da    PI: 8.1614
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g568240.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.62.3e-18102191299
                       EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
                B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                       +kv++ps+v+   +l lpkkf+ +h   ++++++++lede+g+++e k+     +  + l++GW++F  a++L egD+v+F+++  s+f  +v
  Pd.00g568240.m01 102 LKVMLPSHVTGCFWLGLPKKFCCDHL--PKQDTMIVLEDENGKEFETKY--LAEK--VGLSGGWRGFSMAHKLLEGDIVIFHVVTPSKF--KV 186
                       699*******************8884..347889***************..4444..55***********************8876888..88 PP

                       EEE-S CS
                B3  95 kvfrk 99 
                        ++r+
  Pd.00g568240.m01 187 YIIRS 191
                       88876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    
MAVLQNQKHS SFSDPPPPSK SNRGRLPKNK EKLFSKKSSC LTQSQMTKSI VVSANPKMPE  60
SSRKWKRATV ESLYDTSQAQ SSVLERAKEV EASLDPKFPT LLKVMLPSHV TGCFWLGLPK  120
KFCCDHLPKQ DTMIVLEDEN GKEFETKYLA EKVGLSGGWR GFSMAHKLLE GDIVIFHVVT  180
PSKFKVYIIR SNGLDEADCA VGLMRLDDCI KQMDTGHIIS CEREESGNLE PIPEDHAIAF  240
NTKSRPLSDQ SENDSEDLGF EVLDGLRLSE SVVPFKEMYC MDNFNVLVNG LNINSEFSKY  300
ILNKYYELCC SQNSFLHEHL LEGLNCKLIV GVISETINIA DAIRACKITT SEGYFSTWNK  360
TLIAFEGLGM NVRFLRARLD QLAILASKSK RFKEARLEEL RGKAFGRKRG HK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.12e-40B3 family protein