PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g568260.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 339aa    MW: 38463.1 Da    PI: 7.1266
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g568260.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.77.8e-1732119297
                       EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
                B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                       +k +++s+v++ ++l+lpk+f+  h   +  ++tltle esg+++++ +    +++  +l++GWk+F+ a++L++gD +v++l++  +f  +v
  Pd.00g568260.m01  32 VKSMIHSNVSSWNCLTLPKQFCHLHL--PLHDTTLTLEVESGEKYRIIF--LAGKR--ILSAGWKKFCTAHKLRVGDLLVLRLVRPLKF--KV 116
                       6899******************6662..346789***************..55543..69**********************9985555..55 PP

                       EEE CS
                B3  95 kvf 97 
                        ++
  Pd.00g568260.m01 117 YIL 119
                       554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MFDNFNEHEK SSASTQVEEI QAILGAEYPI VVKSMIHSNV SSWNCLTLPK QFCHLHLPLH  60
DTTLTLEVES GEKYRIIFLA GKRILSAGWK KFCTAHKLRV GDLLVLRLVR PLKFKVYILG  120
RYNLAEVDAA FSLLKLNACA KHEVLEENHP KPLSRDVCQG NIRKTSLMLD TKPELIDNQT  180
EEDNEEFGSK FPGGTRYPVP AADFEDVRSI ENFTILVNGV TIDSWLSKQL RTNYYDLCSS  240
QGSFLHDHLL KSINSKLAAE IITETTNIAN AIRARKLSAS HADYEMWEKT LNAFELLGMD  300
VGFLHARLKR LLSPSFRSEE AVELKRREDK VEQICAGGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.12e-13B3 family protein