PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g568760.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 112aa    MW: 12976 Da    PI: 8.4588
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g568760.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B336.58.6e-12690185
                      EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEE.TTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE- CS
                B3  1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltled.esgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkld 85
                      f+kvl+ sdv    rlv+    +e     ++ +++ +++ d ++g+++e+kl+ r+++++ ++ ++GW+ Fv++ g+ +gD++ F  +
  Pd.00g568760.m01  6 FEKVLKASDVD---RLVVTTAMLEMLpPVDPDRDIPIRVFDnQKGKVYEFKLSSRRGGKKpVFQSRGWRVFVNDRGIAAGDVLYFWAE 90
                      67777777776...46777777766673344455556655559*********99888888566669*******************754 PP
Sequence ? help Back to Top
Protein Sequence    Length: 112 aa     Download sequence    
MELDRFEKVL KASDVDRLVV TTAMLEMLPP VDPDRDIPIR VFDNQKGKVY EFKLSSRRGG  60
KKPVFQSRGW RVFVNDRGIA AGDVLYFWAE DDPFHGSQYC IALYKPNLFP HL