PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g569290.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 420aa    MW: 47767.5 Da    PI: 9.1446
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g569290.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.74.2e-181099398
                      EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                B3  3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
                       +l+ s++l+ ++l++p +f+++++ +   s+  tl  ++g++W+v +  +k ++++++ +GW+eF +   +++g f++F+++g+s+f  +v++f
  Pd.00g569290.m01 10 HKLILSSTLQAKQLMIPENFVKKFEDD--LSTVATLSVPDGNVWRVGI--KKADNKFWFHDGWQEFIERYSIRVGYFLTFRYEGHSSF--TVHIF 98
                      5677789999999***********877..88899999***********..**********************************9999..88888 PP

                      - CS
                B3 98 r 98
                      +
  Pd.00g569290.m01 99 N 99
                      5 PP
2B3598.5e-19306395497
                       E-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
                B3   4 vltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                       vl ps+  + ++++lp  fae++ +g++     ++l++++gr+W v++ yr+++    l++GW eF  +n+L egD++vF+l + +e  l+v+
  Pd.00g569290.m01 306 VLRPSYLYRGCIMYLPSCFAEKNlNGVSG---FIKLQSSDGRQWPVRCLYRGGR--AKLSQGWYEFTLENNLGEGDVCVFELLKMKEVVLKVT 393
                       78899******************877743...5***************665555..66***********************988777767777 PP

                       EE CS
                B3  96 vf 97 
                       vf
  Pd.00g569290.m01 394 VF 395
                       65 PP
Sequence ? help Back to Top
Protein Sequence    Length: 420 aa     Download sequence    
MKNMIRPCFH KLILSSTLQA KQLMIPENFV KKFEDDLSTV ATLSVPDGNV WRVGIKKADN  60
KFWFHDGWQE FIERYSIRVG YFLTFRYEGH SSFTVHIFNL TTAEINYQPN ALSSTGGSVY  120
RHQVFEEMED DDSVEILGSS PKSIVTDSLR DKLFGDCATQ LIPGKDYNPP ALQNLFNGSK  180
PKNCMNWPDA GNPHPSKGSG LQAGNQSSRE IGVQFNVTEL KKTVDEVKLR SSGEDIRSMK  240
KTMRKKRKLD PTVQESSSQH EKEVEIRFRF YESASARKRT VTAEERERAI NAAKTFEPVN  300
PFCRVVLRPS YLYRGCIMYL PSCFAEKNLN GVSGFIKLQS SDGRQWPVRC LYRGGRAKLS  360
QGWYEFTLEN NLGEGDVCVF ELLKMKEVVL KVTVFCVVEA AGFVNQPPQQ NASQAKMIRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-134B3 family protein