PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g570780.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 262aa    MW: 29873.8 Da    PI: 4.9852
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g570780.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY31.53.5e-10116150234
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST..T--- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpv 34 
                       dDg+ WrKYGqK + + +++r Y + +    +C++
  Pd.00g570780.m01 116 DDGHGWRKYGQKRILNFKHSRDYLKASELllDCTS 150
                       8************************9987778876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MTSHDNNVNR RARVEASRHM LYDVEAHLAV GGNRVLNLGE SDEEIVSGDQ IQEISSGGGS  60
ADSSSWDANH TAAVIKSEDF YEESCKSTST FKDRRGSYKR RKTSHSWTRD TPALTDDGHG  120
WRKYGQKRIL NFKHSRDYLK ASELLLDCTS PRESSNFIRF GDTKQDHPFF SFFTSVKKEE  180
LVFKEESIIK EEIPPTSDDH VITSHDNHSW LCDYLVSPDL TMFESSVPPN GFSSTLDEFD  240
HEDVISRLMM GSFDLDEVLQ YI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.11e-08WRKY family protein