PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g576910.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 211aa    MW: 24145.8 Da    PI: 5.3331
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g576910.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.82.1e-172669146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                      rg+ T++Ed+l++++++++G++ W+ Ia++++ gRt++++k++w++
  Pd.00g576910.m01 26 RGNYTQQEDDLILKLHEEFGNK-WSMIAAKLP-GRTDNEIKNHWNT 69
                      899*******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MITGISRCGK SCRLRWTNYL RPGVKRGNYT QQEDDLILKL HEEFGNKWSM IAAKLPGRTD  60
NEIKNHWNTR FKKLTKRNPT SSQLAKEQPC KHESSPTVTS QNTELGAQSG PKFDASVHQI  120
LESSPLSPET FSSDSSSLSS NQASASTTTS WFNESSGDFW TEPFQLYVQS NYPVNYMREE  180
EVLSSPSLTF YDMEDMDLFY QVMPTWQENI D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38620.13e-38MYB family protein