PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g576920.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 173aa    MW: 19589.7 Da    PI: 3.9046
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g576920.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding284.9e-091445132
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg 32
                      +g WT+eEd +l+ +v+++G  +W+  +r  g
  Pd.00g576920.m01 14 KGTWTPEEDRKLIAYVTRYGCWNWRQLPRFAG 45
                      799*****************99**99999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MVRTPCRDEN GMKKGTWTPE EDRKLIAYVT RYGCWNWRQL PRFAGLVELA VDQLTKNATI  60
LPNADETADH LQVPQTDHDI LDNIFQLSSP QPSSSEVSSL TTDNAAVVLS SVNNDNWVNY  120
VEEDNVISSM EAFADVQFGD DFWTEPFLAD TSYIPCGLST LSMDSEFFYP PFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34670.17e-16MYB family protein