PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g581830.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ARF

Protein Properties

Length: 928aa MW: 102976 Da PI: 6.2879

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g581830.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	64.7	1.4e-20	126	213	1	83
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 f+k+lt sd++++g +++p++ ae++ + +++ ++l+ +d++ W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F Pd.00g581830.m01 126 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfsM-QPPA-QELMAKDLHDSAWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFI 213 99***************************954.5444.48********************************************96 PP
2	Auxin_resp	113.4	2e-37	214	288	9	83
Auxin_resp 9 svFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 s+F++++nPras+seFvv+++k++ka++++vs+GmRf+m+fete+s rr++Gt++g+sd+d+vrW+nS+Wr+L+ Pd.00g581830.m01 214 SPFTIFFNPRASPSEFVVPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISDMDTVRWKNSQWRNLQ 288 89***********************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 928 aa Download sequence
MKAPTNGFLA TSGEGEQKRI NSELWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKE 60 TDFIPNYPNL PSKLICMLHN VTLHADTETD EVYAQMTLQP VNKYEKEAML ASDMGLKQSR 120 QPSEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQELMAKD LHDSAWTFRH 180 IYRGQPKRHL LTTGWSVFVS TKRLFAGDSV LFISPFTIFF NPRASPSEFV VPLAKYNKAM 240 YTQVSLGMRF RMMFETEESG VRRYMGTITG ISDMDTVRWK NSQWRNLQVG WDESTAGERP 300 SRVSIWEIEP VVTPFYICPP PFFRPKFPKQ PGMPDDESDI ENAFKRAMPW LGDDFGMKSA 360 PNSIFPGLSL MQWMNMQQNN QFSAAQSGYF PSMVPPTGLQ NNLSTDDPSK LLSFQAPVLS 420 APGVQLNKSA PQNQIPGQNS HQPVMFSQLQ QQQLQTGNTQ SQQTVHSSSK NSFQFTTGSQ 480 DSQLQQQQLE PQPSLLQRQQ QSAQLQQSSL QLLHQSVSQK QQLAHQQNQQ LQQLPLSQHH 540 QQPLSGNSFS ADKLLNNNFS APSLMQSQHI SSVQPQSQHK PLTAIRSHSG LTEGDGPSCS 600 TSPSTNNCQM SPSNFLNRNQ QGTAMLLGDS VAEPASNLVQ ELQSKSDIRI KHEFPSSKGP 660 DQIKYKGTIT DQLEASSSGT SYCLDASTIQ QNYALPTFCL DSDVQSHPRN SLPFSANIEG 720 LAPDTLLSRG YDSQKDLQNL LSNYGGTPRD IETELSTAAI SSQSFGAANL PFKPGCSSDV 780 AINEAGVLSN GLWANQAQRM RTYTKVQKRG SVGRCIDVTR YKGYDELRHD LARMFGIEGQ 840 LEDPHRTDWK LVYVDHENDI LLVGDDPWEE FVGCVQSIKI LSSVEVQQMS LDGDLGNVPV 900 PNQACSGSDS GNAWRVPYDD NSAASFNR

Sequence ? help Back to Top

Protein Sequence Length: 928 aa Download sequence

MKAPTNGFLA TSGEGEQKRI NSELWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKE  60
TDFIPNYPNL PSKLICMLHN VTLHADTETD EVYAQMTLQP VNKYEKEAML ASDMGLKQSR  120
QPSEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQELMAKD LHDSAWTFRH  180
IYRGQPKRHL LTTGWSVFVS TKRLFAGDSV LFISPFTIFF NPRASPSEFV VPLAKYNKAM  240
YTQVSLGMRF RMMFETEESG VRRYMGTITG ISDMDTVRWK NSQWRNLQVG WDESTAGERP  300
SRVSIWEIEP VVTPFYICPP PFFRPKFPKQ PGMPDDESDI ENAFKRAMPW LGDDFGMKSA  360
PNSIFPGLSL MQWMNMQQNN QFSAAQSGYF PSMVPPTGLQ NNLSTDDPSK LLSFQAPVLS  420
APGVQLNKSA PQNQIPGQNS HQPVMFSQLQ QQQLQTGNTQ SQQTVHSSSK NSFQFTTGSQ  480
DSQLQQQQLE PQPSLLQRQQ QSAQLQQSSL QLLHQSVSQK QQLAHQQNQQ LQQLPLSQHH  540
QQPLSGNSFS ADKLLNNNFS APSLMQSQHI SSVQPQSQHK PLTAIRSHSG LTEGDGPSCS  600
TSPSTNNCQM SPSNFLNRNQ QGTAMLLGDS VAEPASNLVQ ELQSKSDIRI KHEFPSSKGP  660
DQIKYKGTIT DQLEASSSGT SYCLDASTIQ QNYALPTFCL DSDVQSHPRN SLPFSANIEG  720
LAPDTLLSRG YDSQKDLQNL LSNYGGTPRD IETELSTAAI SSQSFGAANL PFKPGCSSDV  780
AINEAGVLSN GLWANQAQRM RTYTKVQKRG SVGRCIDVTR YKGYDELRHD LARMFGIEGQ  840
LEDPHRTDWK LVYVDHENDI LLVGDDPWEE FVGCVQSIKI LSSVEVQQMS LDGDLGNVPV  900
PNQACSGSDS GNAWRVPYDD NSAASFNR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein