PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g583090.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 105aa    MW: 11533.1 Da    PI: 4.5909
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g583090.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H223.11.9e-076687223
                      EETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                      +C+ Cg +F+ + +Lk+H+++H
  Pd.00g583090.m01 66 TCQECGATFKKPAYLKQHMQSH 87
                      6*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 105 aa     Download sequence    
MRTTALLYLT VESKSSVGSG CVDANRMIND ALLCLDHCDL YSLEEEMEMA EETDGDGKGE  60
REKSNTCQEC GATFKKPAYL KQHMQSHSLE VSEVVLRKPA AACIA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72050.23e-11C2H2 family protein