PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g589310.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 401aa MW: 44438.6 Da PI: 6.7435

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g589310.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	106.4	1.4e-33	106	207	1	100
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k ltpsdv+k++rlv+pk++ae++ gg+ ++ l++edesg+sW+++++y+++s++yvltkGW+++vk+++L++gD+v+F++ ++++ Pd.00g589310.m01 106 FEKPLTPSDVGKLNRLVIPKQHAEKYfplgGGD--SGLLLSFEDESGKSWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVVLFERRRSHT 196 99*************************7666..6679********************************************888799 PP E..EEEEE-SS CS B3 90 felvvkvfrks 100 +l+++++r+s Pd.00g589310.m01 197 DRLLIGWRRRS 207 99****985 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MSINHFSSDH PETQWWPNTA HQQQQQDPSR PHFLPQFCQD SHHHNYQAWL NSQEQPTPMS 60 PTPPTLNFNL NQNDAESDHA NQLQHQLLLQ SSPPLDDHDE ENEPMFEKPL TPSDVGKLNR 120 LVIPKQHAEK YFPLGGGDSG LLLSFEDESG KSWRFRYSYW NSSQSYVLTK GWSRYVKEKR 180 LDAGDVVLFE RRRSHTDRLL IGWRRRSAAA TPSAHDSGPG ATQVSGGAGE SSGSGSAGGW 240 TRMFYSAPQH NNNDGGSSYP AHQYRNHSVA PYPPDCLHAA GSGVQSMSQT TSSVGSSKIL 300 RLFGVNLECQ QQADHESEPS TPDGSSSLSM SSSQGPTPHH HLYPRAAYDY GADQRVKGKM 360 MGGVHRGVEK RVGRADVILA SSTENDGKLF SGSLKVEESF F

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MSINHFSSDH PETQWWPNTA HQQQQQDPSR PHFLPQFCQD SHHHNYQAWL NSQEQPTPMS  60
PTPPTLNFNL NQNDAESDHA NQLQHQLLLQ SSPPLDDHDE ENEPMFEKPL TPSDVGKLNR  120
LVIPKQHAEK YFPLGGGDSG LLLSFEDESG KSWRFRYSYW NSSQSYVLTK GWSRYVKEKR  180
LDAGDVVLFE RRRSHTDRLL IGWRRRSAAA TPSAHDSGPG ATQVSGGAGE SSGSGSAGGW  240
TRMFYSAPQH NNNDGGSSYP AHQYRNHSVA PYPPDCLHAA GSGVQSMSQT TSSVGSSKIL  300
RLFGVNLECQ QQADHESEPS TPDGSSSLSM SSSQGPTPHH HLYPRAAYDY GADQRVKGKM  360
MGGVHRGVEK RVGRADVILA SSTENDGKLF SGSLKVEESF F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06250.2	3e-51	B3 family protein