PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g589460.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 265aa    MW: 29778.8 Da    PI: 11.3851
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g589460.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM46.31.3e-143511933111
               NAM  33 vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksgyWkatgkdkevlskkgelvglkktLvfykg 111
                        + + +iy+ +P +Lp   k++ ++ +fF+k+ +++a g+rk+r+        +++ +W++tgk+k++++ +g ++g+kk+++  k+
  Pd.00g589460.m01  35 SFGDNGIYYDHPANLP-GSKNDGSSFHFFHKTINAHAAGHRKRRKvdchrslaAEHVRWHKTGKTKPIME-NGVQKGCKKIMMVRKK 119
                       467789**********.556778899******************86888888877999************.999*******997644 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MTHGGNFAKL IIGARRYMGH RLISIKPDKG LMSKSFGDNG IYYDHPANLP GSKNDGSSFH  60
FFHKTINAHA AGHRKRRKVD CHRSLAAEHV RWHKTGKTKP IMENGVQKGC KKIMMVRKKA  120
KVDQFEGKEK PIKGKRKVRV RTVVVRRNFG RRFFPVAVLC MAVHGLNGSR LPPLQCFAKF  180
SQSPGFFFQI AIVAQPKMAS ESGRIRFPVG PEVQPLNEHN RRVSISNHLF GEISGELPPR  240
LKYLDLSSNS FSGEILKSIV NLTGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01600.19e-27NAC family protein