PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g592290.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 227aa    MW: 24467.3 Da    PI: 5.443
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g592290.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.88.4e-13163208655
                       HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +++Er RR ri +++ +L++l+P+     +k  + a++L +AveY+k Lq
  Pd.00g592290.m01 163 SIAERVRRTRISDRIRKLQDLVPNM----DKQTNTADMLDEAVEYVKFLQ 208
                       689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MQRAAGGSSS GGGEVSRGGG LGRFCSAPAT WLEALLEEEE EDPLKPAQCL TELLAENTGA  60
TSVGFGSTTV DPVSYEAASA AGFLSRQNSS PAEFLGSSND GSEGYFSGFG IPAHLDFVSL  120
SPNSSSPSAN KRVREVKLEE GGLEDAVPCR VRAKRGCATH PRSIAERVRR TRISDRIRKL  180
QDLVPNMDKQ TNTADMLDEA VEYVKFLQKQ IQELSEHQRR CKCIAKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G35460.18e-60bHLH family protein