PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g593210.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 85aa    MW: 9509.47 Da    PI: 6.5232
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g593210.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP243.11e-132068155
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      s+ykGV   + +grW A+I++      ++r++lg+f  +eeAaka++ a  +++g
  Pd.00g593210.m01 20 SRYKGVVPQP-NGRWGAQIYEK-----HQRVWLGTFNAEEEAAKAYDIASIRFRG 68
                      79****9888.8*********3.....5*********************999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 85 aa     Download sequence    
MDVLNESTSE AANSNKLPSS RYKGVVPQPN GRWGAQIYEK HQRVWLGTFN AEEEAAKAYD  60
IASIRFRGLE TITNFNQNQG EALHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25730.14e-35RAV family protein