PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g593220.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 211aa    MW: 24628.2 Da    PI: 8.7918
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g593220.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B396.91.3e-3049151198
                       EEEE-..-HHHHTT-EE--HHH.HTT.....---....--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkke..esktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+kv tpsdv++++r+v+pk++ae+h     +  +e  +++ l +ed +g++W+++++y+ +s++yvltkGW +Fvk+++Lk+gD+v F++++
  Pd.00g593220.m01  49 FEKVATPSDVGRLNRMVIPKQHAEKHfpshlS--EElcKGVLLNFEDGEGKVWRLRYCYWSSSQSYVLTKGWTRFVKEKKLKAGDVVRFERSR 139
                       99*************************99552..44448899************************************************988 PP

                       SSEE..EEEEE- CS
                B3  87 rsefelvvkvfr 98 
                        +e++ ++  + 
  Pd.00g593220.m01 140 GEEKKIFIDCRP 151
                       788888877665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MLRKHSYTNE LEMYKLKLFN AGDDDAARKR IKCHVNLTEG YDHQREWLFE KVATPSDVGR  60
LNRMVIPKQH AEKHFPSHLS EELCKGVLLN FEDGEGKVWR LRYCYWSSSQ SYVLTKGWTR  120
FVKEKKLKAG DVVRFERSRG EEKKIFIDCR PRNVEVSGLG EMASRVEVEE PLSRVQVDDG  180
VVRLFGVNIV ETCSCIVDNN MRWRLGERIS S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68840.24e-57RAV family protein