PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g598560.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 147aa    MW: 16206.7 Da    PI: 9.775
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g598560.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.31.2e-1215911093
                      HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelv 93
                       + + rl+lp  f+++ +++k    + ++  +   sW v++   ++ ++   +++GW+eFv+ +gLk g++++Fk+++++ f  +
  Pd.00g598560.m01 15 GF-NTRLSLPVAFCSSLSENKLD--KAVI-KSCLGSWLVRV--GRTVDGvLSFEEGWEEFVNHHGLKLGEILIFKHNSKRAF--N 91
                      44.457********999766433..3444.556689*****..666666599***********************8765555..3 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MAVKCSKFFK FLAPGFNTRL SLPVAFCSSL SENKLDKAVI KSCLGSWLVR VGRTVDGVLS  60
FEEGWEEFVN HHGLKLGEIL IFKHNSKRAF NVVAYEAHGS EKVYDSKGKS PSEATASSTS  120
RTLFACTMKK SHGDPHKAYL VSFLTSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.15e-11B3 family protein