PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g598580.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 264aa    MW: 30014.4 Da    PI: 8.5812
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g598580.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.77.5e-1720104899
                       -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                        d ++++ l++p  f+++++g      + t++ ++g+ W v+l  ++++++ ++ kGW +Fvk++ +++ Df++F +dg sef   v++++k
  Pd.00g598580.m01  20 DDDFSQH-LRIPPAFIKNFNGRR--LGKCTMRGPTGKCWAVEL--EQRRDGLFFHKGWPGFVKDHFIESEDFLIFDYDGGSEF--DVTIYDK 104
                       4666666.********8887774..348***************..*********************************98998..8888876 PP
2B334.34.3e-11141236198
                       EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                       f k+++p d  +   l +pk+ a +      +g+   + t++l+d++grsW v+l +  ++gr  +++ W+   + n++  gD+++F++++  
  Pd.00g598580.m01 141 FTKTFKPRDLYS---LFIPKSIAVTEglmssEGV-LIKETIMLQDQTGRSWLVQL-HVTCDGRLEMKREWRTCRDTNQISHGDTIIFEFVK-- 226
                       667776666665...5699999988877765333.35679***************.678888899***********************765.. PP

                       EE..EEEEE- CS
                B3  89 efelvvkvfr 98 
                       ++  ++++fr
  Pd.00g598580.m01 227 QGVILIHIFR 236
                       6777999988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MDKKLKCPLE RPSFRVFLVD DDFSQHLRIP PAFIKNFNGR RLGKCTMRGP TGKCWAVELE  60
QRRDGLFFHK GWPGFVKDHF IESEDFLIFD YDGGSEFDVT IYDKTCCEKD VKAAAKRHAS  120
DHLAETSTGG PISFRSENAC FTKTFKPRDL YSLFIPKSIA VTEGLMSSEG VLIKETIMLQ  180
DQTGRSWLVQ LHVTCDGRLE MKREWRTCRD TNQISHGDTI IFEFVKQGVI LIHIFRGRGE  240
GNSSSVVVLS GVLPRKSSQR PIAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.11e-16B3 family protein