PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g600070.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

SRS

Protein Properties

Length: 206aa MW: 21770 Da PI: 7.7952

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g600070.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	108.4	1.1e-33	14	68	3	57
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqla 57 s +++CqdCGnqakkdC h+RCRtCCksrgf+C+thvkstWvpaakrrerq+q + Pd.00g600070.m01 14 SSGMNCQDCGNQAKKDCPHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQEQFS 68 5689***********************************************9865 PP
2	DUF702	89.9	5.8e-28	70	123	100	153
DUF702 100 letsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153 le +++P+evss+avfrcvrvs++dd+++++aYqtav+igGhvfkG+LydqG++ Pd.00g600070.m01 70 LELAQFPSEVSSPAVFRCVRVSAMDDADDQYAYQTAVNIGGHVFKGLLYDQGPD 123 67789***********************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence
MRQGGGGGLG GSSSSGMNCQ DCGNQAKKDC PHMRCRTCCK SRGFQCQTHV KSTWVPAAKR 60 RERQEQFSGL ELAQFPSEVS SPAVFRCVRV SAMDDADDQY AYQTAVNIGG HVFKGLLYDQ 120 GPDGQYYPSS STGGGGESSS GGRHDHQEGG GAHPHHQQHN LVTVAATAGT TSHGGNPSTT 180 LLDPSLFPTP LNAFMAGTQI FPPPRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75520.1	2e-56	SRS family protein