PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g602420.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 457aa MW: 52097.8 Da PI: 6.5647

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g602420.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.5	1.5e-18	187	233	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd ll+++v+q+G + W+ Ia++++ gR +kqc++rw+++l Pd.00g602420.m01 187 KGQWTIEEDRLLIQLVEQYGVRKWSHIAQMLP-GRIGKQCRERWHNHL 233 799***************************.***********97 PP
2	Myb_DNA-binding	58.3	1.7e-18	239	281	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++ W++eEd++l++a+++ G++ W+ Ia++++ gRt++++k++w+ Pd.00g602420.m01 239 KDTWSEEEDKILIQAHAEIGNK-WAEIAKRLP-GRTENSIKNHWN 281 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
MMKLYNMKDE FPFEASSSSS KGNYNYLQDF HHLDHQFQVN GSSSNPMFGV QNPCFDPYND 60 TTYTYEASTT DVKFYECKPH NAETNMGHGQ VLDNFQSGSG YLNFPTHTSN PLDHLMGSSH 120 RSATNFLPLD YQDIKPMNFV VPDEVSCINN TDQNGYYKKF GMNGKSRVSA LTRGSTYKGR 180 KKSNVVKGQW TIEEDRLLIQ LVEQYGVRKW SHIAQMLPGR IGKQCRERWH NHLRPDIKKD 240 TWSEEEDKIL IQAHAEIGNK WAEIAKRLPG RTENSIKNHW NATKRRQYSK RKCRSKYPRG 300 SLLQEYIKSL NLDSTGSSTG RQRKNKSGNN NATSPNNMAS SSTKSHTQQT QNNVGFSYAN 360 DRLVPNHDFN EDPDFCFDDN MFQEGCSIDS LLDDIPCALV LGENNGDFDG KIMAQASVVA 420 DEEKDFEMEM QVDVGPVMES SEVKKELDLV EMISQVN

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

MMKLYNMKDE FPFEASSSSS KGNYNYLQDF HHLDHQFQVN GSSSNPMFGV QNPCFDPYND  60
TTYTYEASTT DVKFYECKPH NAETNMGHGQ VLDNFQSGSG YLNFPTHTSN PLDHLMGSSH  120
RSATNFLPLD YQDIKPMNFV VPDEVSCINN TDQNGYYKKF GMNGKSRVSA LTRGSTYKGR  180
KKSNVVKGQW TIEEDRLLIQ LVEQYGVRKW SHIAQMLPGR IGKQCRERWH NHLRPDIKKD  240
TWSEEEDKIL IQAHAEIGNK WAEIAKRLPG RTENSIKNHW NATKRRQYSK RKCRSKYPRG  300
SLLQEYIKSL NLDSTGSSTG RQRKNKSGNN NATSPNNMAS SSTKSHTQQT QNNVGFSYAN  360
DRLVPNHDFN EDPDFCFDDN MFQEGCSIDS LLDDIPCALV LGENNGDFDG KIMAQASVVA  420
DEEKDFEMEM QVDVGPVMES SEVKKELDLV EMISQVN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	1e-109	MYB family protein