PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g604050.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 778aa MW: 86208 Da PI: 5.6049

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g604050.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	39.1	1.3e-12	25	101	17	99
E--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 17 vlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 lp kfa + ++ +++ +led+ g +Wev + ++ g+ l++GW+ F +++Lk g+f++F ++++s f v +++k Pd.00g604050.m01 25 FLPPKFAPTVsALV---NQKAVLEDSLGLQWEVII--SRINGSLSLKQGWNAFSLDHDLKIGEFLIFNYISSSHF--IVNIYDK 101 68999998885444...3479************..9999999************************98999..9999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 778 aa Download sequence
MGALAPLSPC IPDEDDILLK NAVEFLPPKF APTVSALVNQ KAVLEDSLGL QWEVIISRIN 60 GSLSLKQGWN AFSLDHDLKI GEFLIFNYIS SSHFIVNIYD KSGCEKLNFP EAINQKKRTR 120 DNRKYTFKAG PSHTIDRSSM NKRDSRTSVV YGSDADIGHH LHETNDTGKA LIVTENDSTQ 180 DNSHERSRLN PKEAYIEEMI CMFDRDVGDK QEEDRTYIFD LSDFEMLKKN SGTGGSNEVT 240 AMDETCTDHD DSLLGLINEA GSVDKSPVAK EAVTAEIPSD ASKFDGSRIN NSSETKAQNT 300 ASPSHEGLCI CKTSGHLFPK AALKPEENEN ISNISNRAIN KCPTAGRSES LSGNEVVISG 360 KEHDLIDDSC QSANKKISEI SEPFDKMMKA IKIESVELTS DPSSQKIIPQ INGESVKVVN 420 PVGSKISNMI RTENDSAVPV VKSEPVDPVI TLPISSSFSC QVQHPGVQDL MMTDIRNLQA 480 FALCIQKTDI KFDLYSVTKE MEKQIGYEFD FMREANAMEK IRRFLYENNK KSPVLVPRLM 540 RDIVTRRVLV MEYIDGVPIL NLGAEIAKRG INPGGKIAEA AKQKILQSLT LAYGQMILKS 600 GFFHADPHPG NILICKGSEV ALLDYGQVKD LPDELRLGYA NLVLAIADGD PIRASESYRE 660 LGIGTLSKCE NEQHELLKLA ETMFDTKLPP GVTMLQPFSE ESSIKKIAVE AFPEELFSVL 720 RTVHLLRGLS VGLGINYSCA EQWRPIAEEA LFRAGRLTGK AVKARGRRRG LSRLFWRD

Sequence ? help Back to Top

Protein Sequence Length: 778 aa Download sequence

MGALAPLSPC IPDEDDILLK NAVEFLPPKF APTVSALVNQ KAVLEDSLGL QWEVIISRIN  60
GSLSLKQGWN AFSLDHDLKI GEFLIFNYIS SSHFIVNIYD KSGCEKLNFP EAINQKKRTR  120
DNRKYTFKAG PSHTIDRSSM NKRDSRTSVV YGSDADIGHH LHETNDTGKA LIVTENDSTQ  180
DNSHERSRLN PKEAYIEEMI CMFDRDVGDK QEEDRTYIFD LSDFEMLKKN SGTGGSNEVT  240
AMDETCTDHD DSLLGLINEA GSVDKSPVAK EAVTAEIPSD ASKFDGSRIN NSSETKAQNT  300
ASPSHEGLCI CKTSGHLFPK AALKPEENEN ISNISNRAIN KCPTAGRSES LSGNEVVISG  360
KEHDLIDDSC QSANKKISEI SEPFDKMMKA IKIESVELTS DPSSQKIIPQ INGESVKVVN  420
PVGSKISNMI RTENDSAVPV VKSEPVDPVI TLPISSSFSC QVQHPGVQDL MMTDIRNLQA  480
FALCIQKTDI KFDLYSVTKE MEKQIGYEFD FMREANAMEK IRRFLYENNK KSPVLVPRLM  540
RDIVTRRVLV MEYIDGVPIL NLGAEIAKRG INPGGKIAEA AKQKILQSLT LAYGQMILKS  600
GFFHADPHPG NILICKGSEV ALLDYGQVKD LPDELRLGYA NLVLAIADGD PIRASESYRE  660
LGIGTLSKCE NEQHELLKLA ETMFDTKLPP GVTMLQPFSE ESSIKKIAVE AFPEELFSVL  720
RTVHLLRGLS VGLGINYSCA EQWRPIAEEA LFRAGRLTGK AVKARGRRRG LSRLFWRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18960.1	5e-10	B3 family protein