PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g604610.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YC
Protein Properties Length: 186aa    MW: 20329 Da    PI: 4.8099
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g604610.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC175.17e-5511024102
             NF-YC   4 sfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflv 93 
                       +fw++q   ie+++dfknh+lPlarikki+kadedv+misaeaPvl++kacelfilelt+rswlhaeenkrrtl+k+diaaa+trtdifdflv
  Pd.00g604610.m01   1 MFWNYQrhdIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPVLFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLV 93 
                       6999998889*********************************************************************************** PP

             NF-YC  94 divprdelk 102
                       divprde+k
  Pd.00g604610.m01  94 DIVPRDEIK 102
                       ******975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MFWNYQRHDI EQVNDFKNHQ LPLARIKKIM KADEDVRMIS AEAPVLFAKA CELFILELTI  60
RSWLHAEENK RRTLQKNDIA AAITRTDIFD FLVDIVPRDE IKDEAVGLGG MVGATASGVP  120
YYYPPMGQPA GGPGGMMIGR PAMDPAAVYG VQPPSQAWQS VWQTAADDGS YGSGGSSGQG  180
NLDGQS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17177RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48590.15e-85NF-YC family protein