PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g609140.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ARR-B
Protein Properties Length: 319aa    MW: 35156.6 Da    PI: 9.4218
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g609140.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like88.36.9e-28170222255
           G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       pr++W++eLH +Fv av+qL G e+A+Pk+il+lm+v+gLt+e+v+SHLQkYRl
  Pd.00g609140.m01 170 PRVVWSKELHGKFVAAVHQL-GLERAVPKKILDLMNVQGLTRENVASHLQKYRL 222
                       8*******************.********************************8 PP
2Myb_DNA-binding42.71.3e-13171221148
                       TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                       r  W++e++ ++v av+qlG +   +k+I   m+ +g+t++++ s++qky+
  Pd.00g609140.m01 171 RVVWSKELHGKFVAAVHQLGLEraVPKKILDLMNvQGLTRENVASHLQKYR 221
                       678***********************************************7 PP
3Response_reg85.91.1e-28261341109
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 
                       vl vdD+p+ ++ll+ +l++ +y +v++++ + eal +l+e++  +Dl+++D++mp+mdG++ll+ +  e  +lp+i++++h+++e++ + ++
  Pd.00g609140.m01  26 VLAVDDNPICLRLLEGLLQNCQY-QVTTTTRAVEALLMLRESRnrFDLVITDVSMPDMDGFKLLELLGLEM-DLPVIMLSGHSDKELVMKGIS 116
                       799********************.9999***********998889*********************96644.8******************** PP

                       TTESEEEESS--HHHHHH CS
      Response_reg  92 aGakdflsKpfdpeelvk 109
                        Ga d+l Kp+ +eel++
  Pd.00g609140.m01 117 HGACDYLLKPVRKEELTN 134
                       ***************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MSVKAQRGGL VGEDGAMDRF PVGMRVLAVD DNPICLRLLE GLLQNCQYQV TTTTRAVEAL  60
LMLRESRNRF DLVITDVSMP DMDGFKLLEL LGLEMDLPVI MLSGHSDKEL VMKGISHGAC  120
DYLLKPVRKE ELTNIWQHVI RRKKFDSKDQ NKSSSQDKAC HETGEWGQGP RVVWSKELHG  180
KFVAAVHQLG LERAVPKKIL DLMNVQGLTR ENVASHLQKY RLCLKRLSST ATQQASMVAA  240
FGGKDSSYMR MGALDGFGDL RSLAGSQRLS NATLSPYTPG GMLGRLNSPA GLSIRGITSS  300
GLVQPAGQAY CSHWRVQSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.15e-91ARR-B family protein