PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g610540.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 211aa    MW: 23445.2 Da    PI: 7.6045
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g610540.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.24.9e-19550150
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaar 50
                      ++++GVr+++ +g+Wv+eIr+p        +r++lg+f taeeAa+a+++a+
  Pd.00g610540.m01  5 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFETAEEAARAYDEAA 50
                      59*******9.**********8.....334*********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MVQSKKFRGV RQRHWGSWVS EIRHPLLKRR VWLGTFETAE EAARAYDEAA VLMNPRGSSS  60
DLDHSLSEPK GLSEILHAKL RKCSKLPSPS MTCLRLDNES SHIGVWQKRA GQRSDNSNWV  120
MTVQLGKKKN SNNTNAADDH GQSISSSSPL IMSTSESSAS TSSARGPELI AEMDEEEKIA  180
LQMIEELLNR NCPSPSNSSF GIQPGEESFY L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.12e-52ERF family protein