PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g611250.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 477aa    MW: 52923.4 Da    PI: 5.9032
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g611250.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS435.34.5e-133914511374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlsel..aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91 
                       lv+lL++cAe v+ gdl+la +l++++++l  + ++   + ++a yf  AL++r+++         +ps +s     e+   +++f+e++P+l
  Pd.00g611250.m01  91 LVHLLVTCAESVQRGDLALAGSLIENMQTLltRVNTSCGIGKVAGYFIDALSRRIFS---------HPSVAS---AHENELLYHYFYEACPYL 171
                       68***************************954444446899***************9.........333333...456667889********* PP

              GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                       kf+h+taNqaIlea++g+++vH+iDf++++GlQWpaL+qaLa Rp+gpp lR+Tg+g+p+++ +++l+e+g rLa++A++++v+f f+ ++a+
  Pd.00g611250.m01 172 KFAHFTANQAILEAFQGHDCVHVIDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNVRFAFRGVAAS 264
                       ********************************************************************************************* PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       rled+++++L+v+p+Ea+aVn+++qlhrll ++ + +s+++ +L  +++l+Pk+v+vveqeadhn++ Fl+rf+eal+yys++fdslea    
  Pd.00g611250.m01 265 RLEDVKPWMLQVSPKEAVAVNSIMQLHRLLGSDPNRNSPIEMMLGWIRNLNPKIVTVVEQEADHNKTGFLDRFTEALYYYSTMFDSLEAC--- 354
                       ***************************************************************************************999... PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       + + ++ + +++++rei+nvv+cega+r+erhe l+kWr+rl++aGF+p++l+++a kqa++ll  ++ +gyrvee++g+l+lgW++rpL+++
  Pd.00g611250.m01 355 AMQPEKALAEMYIQREICNVVCCEGAARVERHEPLGKWRARLGQAGFRPLHLGSNAFKQASMLLTLFSAEGYRVEENDGCLTLGWHSRPLIAA 447
                       467777888899********************************************************************************* PP

              GRAS 371 SaWr 374
                       SaW+
  Pd.00g611250.m01 448 SAWQ 451
                       ***6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 477 aa     Download sequence    
MVNSPNNLSQ LASDAVLYNP SDIATWVDSL LSEFNHQPLI SLPSDLDFPD VIINPTDLPN  60
DTWTEPLPPP QQHHHQLTVV TAMEEDSGIR LVHLLVTCAE SVQRGDLALA GSLIENMQTL  120
LTRVNTSCGI GKVAGYFIDA LSRRIFSHPS VASAHENELL YHYFYEACPY LKFAHFTANQ  180
AILEAFQGHD CVHVIDFNLM HGLQWPALIQ ALALRPGGPP LLRLTGIGPP SPDGRDSLRE  240
IGLRLAELAR SVNVRFAFRG VAASRLEDVK PWMLQVSPKE AVAVNSIMQL HRLLGSDPNR  300
NSPIEMMLGW IRNLNPKIVT VVEQEADHNK TGFLDRFTEA LYYYSTMFDS LEACAMQPEK  360
ALAEMYIQRE ICNVVCCEGA ARVERHEPLG KWRARLGQAG FRPLHLGSNA FKQASMLLTL  420
FSAEGYRVEE NDGCLTLGWH SRPLIAASAW QVMPTAEATT ANQPVGVINQ NNNANHV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.11e-136GRAS family protein