PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g611900.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Trihelix
Protein Properties Length: 232aa    MW: 27435.1 Da    PI: 4.8129
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g611900.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix262.4e-08122174253
          trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkek 53 
                       Wt++ v +L+e+  ++  +l+r++l+  +W ev++k+ ++ ++er+ +qC+++
  Pd.00g611900.m01 122 WTEHAVFVLLEVWGDRFLQLGRKSLRSEDWHEVAEKVsEASKIERTDTQCRNS 174
                       *************************************677899*******986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MDDMDDDARY HSKAYSLNHH NSSDRRKINI RNTQYSRPIA NRYAEEDDDE LDEFDEGNGR  60
QDHDEEEEEE LPRGLHRNFD ADDGFERHTK KRKVKNLESN YEFAPRVRVP YRDPSSRGEE  120
DWTEHAVFVL LEVWGDRFLQ LGRKSLRSED WHEVAEKVSE ASKIERTDTQ CRNSGEYVFM  180
NTRVYLERSN GFDEMRDSPG EKLTTMMMKR MFLLRISVND AGLVFILKDG GI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24490.11e-36Trihelix family protein