PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g613130.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 243aa    MW: 26899.9 Da    PI: 6.8893
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g613130.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.32.7e-161462148
                      TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                      rg+W++eEd  l+++ + +G+g +W + + + g++R++k+c++rw++yl
  Pd.00g613130.m01 14 RGPWSPEEDTTLKNYLHNHGTGgNWISLPTKAGLNRCGKSCRLRWLNYL 62
                      89*********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MGRAPCCDKS KVKRGPWSPE EDTTLKNYLH NHGTGGNWIS LPTKAGLNRC GKSCRLRWLN  60
YLRPDIKRGG FTEEEDNLIC TLYGTIGTSQ LPGRTDNDVK NYWNTKLKKK FFAANNMKLA  120
SREFPASVPK FEFGTPQDHG TSSSCFDGTL PYLMDVSLGQ SFDQQKQISQ FPHSNFLEVN  180
DFGTCGSRSF TNISSSQEAS SLPTSSILGL ENNYTPWSGD ESGALTDYGF EPPADALLGN  240
FGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49690.14e-63MYB family protein